feat: trying and testing different ways to implement threads

This commit is contained in:
Gromiusz 2024-12-28 13:24:58 +01:00
parent 9ca9b35f8c
commit fd94f597a5
5 changed files with 244 additions and 16 deletions

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@ -2,6 +2,7 @@ import cmath
import math
import itertools
import operator
import multiprocessing
from multiprocessing import Pool
from abc import ABC, abstractmethod
from concurrent.futures import ThreadPoolExecutor
@ -10,7 +11,7 @@ from time_measurement import time_measurement, time_accumulator
import numpy as np
import dask.array as da
class LinearAlgebraUtils(ABC):
class LinearAlgebraUtils:
@staticmethod
@abstractmethod
def dot_product(v1, v2):
@ -62,7 +63,7 @@ class LinearAlgebraUtils(ABC):
pass
class SequentialLinearAlgebraUtils(ABC):
class SequentialLinearAlgebraUtils:
@staticmethod
def dot_product(v1, v2):
return sum(x*y for x, y in zip(v1, v2))
@ -106,11 +107,10 @@ class SequentialLinearAlgebraUtils(ABC):
return [[A[i][j] - B[i][j] for j in range(len(A[0]))] for i in range(len(A))]
class ThreadsLinearAlgebraUtils(ABC):
NUM_THREADS = 4
class ThreadsLinearAlgebraUtils:
NUM_THREADS = multiprocessing.cpu_count()
@staticmethod
@time_measurement(time_accumulator)
def get_chunk_size(data):
num_elements = len(data)
num_threads = min(ThreadsLinearAlgebraUtils.NUM_THREADS, num_elements)
@ -120,7 +120,6 @@ class ThreadsLinearAlgebraUtils(ABC):
@staticmethod
@time_measurement(time_accumulator)
def divide_vectors_to_chunks(v1, v2):
chunk_size, num_threads, remainder = ThreadsLinearAlgebraUtils.get_chunk_size(v1)
@ -134,7 +133,6 @@ class ThreadsLinearAlgebraUtils(ABC):
return chunks
@staticmethod
@time_measurement(time_accumulator)
def divide_vector_or_matrix_to_chunks(v):
chunk_size, num_threads, remainder = ThreadsLinearAlgebraUtils.get_chunk_size(v)
@ -156,6 +154,15 @@ class ThreadsLinearAlgebraUtils(ABC):
results = executor.map(lambda pair: SequentialLinearAlgebraUtils.dot_product(*pair), chunks)
return sum(results)
# @staticmethod
# @time_measurement(time_accumulator)
# def matrix_vector_multiply(A, x):
# chunks = ThreadsLinearAlgebraUtils.divide_vector_or_matrix_to_chunks(A)
# with ThreadPoolExecutor(max_workers=ThreadsLinearAlgebraUtils.NUM_THREADS) as executor:
# func = partial(SequentialLinearAlgebraUtils.matrix_vector_multiply, x=x)
# results = executor.map(func, chunks)
# return [item for sublist in results for item in sublist]
@staticmethod
@time_measurement(time_accumulator)
def matrix_vector_multiply(A, x):

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@ -2,6 +2,7 @@ import pytest
import numpy as np
from matrix_generator import MatrixGenerator
from richardson_method import RichardsonMethod
from threads import RichardsonMethodThreads
from processing_type import ProcessingType
from time_measurement import time_measurement, tests_time
@ -40,10 +41,10 @@ def solution_lib(A, b):
10000
])
@pytest.mark.parametrize("processing_type", [
ProcessingType.SEQUENTIAL,
ProcessingType.THREADS,
ProcessingType.PROCESSES,
ProcessingType.DISTRIBUTED_ARRAYS
# ProcessingType.SEQUENTIAL,
ProcessingType.THREADS#,
# ProcessingType.PROCESSES,
# ProcessingType.DISTRIBUTED_ARRAYS
])
@pytest.mark.parametrize("matrix_type", [
"spd",
@ -67,12 +68,16 @@ def test_richardson_vs_cg(n: int, processing_type: ProcessingType, matrix_type:
else:
raise ValueError("Invalid matrix type specified. Choose 'spd', 'poli3', or 'nemeth12'.")
richardson_solver = RichardsonMethod(processing_type, A, b, lambda_min, lambda_max, max_iterations, size=A.shape[0], tol=1e-7)
solution_richardson, info_richardson = None, None
with capsys.disabled():
solution_richardson, info_richardson = richardson_solver.solve()
if processing_type != ProcessingType.THREADS:
richardson_solver = RichardsonMethod(processing_type, A, b, lambda_min, lambda_max, max_iterations, size=A.shape[0], tol=1e-7)
with capsys.disabled():
solution_richardson, info_richardson = richardson_solver.solve()
else:
with capsys.disabled():
solution_richardson, info_richardson = RichardsonMethodThreads(A, b, lambda_min, lambda_max, max_iterations, tol=1e-7)
# Przechwytywanie wyjścia po solve
captured = capsys.readouterr()
print("Captured output:", captured.out)

72
code/threads.py Normal file
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@ -0,0 +1,72 @@
import numpy as np
import threading
import multiprocessing
import gc
import time
import sys
from time_measurement import time_measurement_longest, longest_time_accumulator, tests_time
import linear_algebra_utils as linAlg
@time_measurement_longest(longest_time_accumulator)
def RichardsonThread(A, b, x, _x, omega, start, end):
for i in range(start, end):
sigma = np.dot(A[i, :], _x) - A[i, i] * _x[i]
x[i] = (1 - omega) * _x[i] + omega * (b[i] - sigma) / A[i, i]
def RichardsonMethodThreads(A, b, lambda_min, lambda_max, max_iterations, x0=None, tol=1e-5):
longest_time_accumulator.total_time = 0
longest_time_accumulator.start = sys.float_info.max
longest_time_accumulator.end = 0
gc.disable()
start_time = time.perf_counter()
n = len(b)
x0 = x0 if x0 is not None else [0.0] * len(b)
x = x0[:]
omega = 0.05#2 / (lambda_min + lambda_max)
num_threads = multiprocessing.cpu_count()
threads = []
chunk_size = n // num_threads
max_iterations = 1000
for _ in range(max_iterations):
_x = x[:]
for i in range(num_threads):
start = i * chunk_size # start jest indeksem w A. Wątki otrzymują kolejny punkt startowy będący wielokrotnością rozmiaru porcji na wątek
end = n if i == num_threads - 1 else (i + 1) * chunk_size
thread = threading.Thread(target=RichardsonThread, args=(A, b, x, _x, omega, start, end))
threads.append(thread)
thread.start()
for thread in threads:
thread.join()
# Ax = linAlg.SequentialLinearAlgebraUtils.matrix_vector_multiply(A, x)
# residual = linAlg.SequentialLinearAlgebraUtils.vector_vector_subtraction(b, Ax)
# if (linAlg.SequentialLinearAlgebraUtils.vector_norm(residual) < tol):
# break
end_time = time.perf_counter()
gc.enable()
total_time = end_time - start_time
sequential_time = total_time - longest_time_accumulator.total_time
print(f"Total: {total_time:.3e}s, Seq: {sequential_time:.3e}s, Parallel (threads): {longest_time_accumulator.total_time:.3e}s, Tests time: {tests_time.total_time:.3e}s")
return x, 0
# # Przykładowe dane wejściowe
# np.random.seed(0) # Ustalanie ziarna dla powtarzalności wyników
# A = np.random.rand(20, 20) + 20 * np.eye(20) # Macierz przekątniowa z losowymi elementami
# b = np.random.rand(20) # Wektor wyrazów wolnych
# omega = 0.2
# n_iterations = 1000
# # Rozwiązanie układu równań metodą Richardson'a
# x = RichardsonMethodThreads(A, b, 5, 5, n_iterations)
# print("Rozwiązanie: ", x)

119
code/threads_nowy.py Normal file
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@ -0,0 +1,119 @@
import numpy as np
import threading
import multiprocessing
import gc
import time
import sys
from time_measurement import time_measurement_longest, longest_time_accumulator, tests_time
import linear_algebra_utils as linAlg
@time_measurement_longest(longest_time_accumulator)
def RichardsonThread(A, b, x, _x, omega, start, end):
for i in range(start, end):
sigma = np.dot(A[i, :], x) - A[i, i] * x[i]
x[i] = (1 - omega) * x[i] + omega * (b[i] - sigma) / A[i, i]
def matrix_vector_multiply(A, x, start, end, Ax):
Ax[start:end] = [sum(xx*yy for xx, yy in zip(row, x)) for row in A[start:end]]
def vector_vector_subtraction(b, Ax, start, end, residual):
residual[start:end] = [xx-yy for xx, yy in zip(b[start:end], Ax[start:end])]
def RichardsonMethodThreads(A, b, lambda_min, lambda_max, max_iterations, x0=None, tol=1e-5):
longest_time_accumulator.total_time = 0
longest_time_accumulator.start = sys.float_info.max
longest_time_accumulator.end = 0
gc.disable()
start_time = time.perf_counter()
n = len(b)
x0 = x0 if x0 is not None else [0.0] * len(b)
x = x0[:]
omega = 2 / (lambda_min + lambda_max)
num_threads = multiprocessing.cpu_count()
threads = []
chunk_size = n // num_threads
for iteration in range(max_iterations):
# chunks = ThreadsLinearAlgebraUtils.divide_vector_or_matrix_to_chunks(A)
# with ThreadPoolExecutor(max_workers=ThreadsLinearAlgebraUtils.NUM_THREADS) as executor:
# func = partial(SequentialLinearAlgebraUtils.matrix_vector_multiply, x=x)
# results = executor.map(func, chunks)
Ax = [0] * len(x)
for i in range(num_threads):
start = i * chunk_size # start jest indeksem w A. Wątki otrzymują kolejny punkt startowy będący wielokrotnością rozmiaru porcji na wątek
end = n if i == num_threads - 1 else (i + 1) * chunk_size
thread = threading.Thread(target=matrix_vector_multiply, args=(A, x, start, end, Ax))
threads.append(thread)
thread.start()
for thread in threads:
thread.join()
residual = [0] * len(b)
for i in range(num_threads):
start = i * chunk_size # start jest indeksem w A. Wątki otrzymują kolejny punkt startowy będący wielokrotnością rozmiaru porcji na wątek
end = n if i == num_threads - 1 else (i + 1) * chunk_size
thread = threading.Thread(target=vector_vector_subtraction, args=(b, Ax, start, end, residual))
threads.append(thread)
thread.start()
for thread in threads:
thread.join()
x = self.LinAlg.vector_vector_addition(x, self.LinAlg.scalar_vector_multiply(self.omega, residual))
for i in range(num_threads):
start = i * chunk_size # start jest indeksem w A. Wątki otrzymują kolejny punkt startowy będący wielokrotnością rozmiaru porcji na wątek
end = n if i == num_threads - 1 else (i + 1) * chunk_size
thread = threading.Thread(target=scalar_vector_multiply, args=(A, b, x, omega, start, end))
threads.append(thread)
thread.start()
for thread in threads:
thread.join()
x = self.LinAlg.vector_vector_addition(x, self.LinAlg.scalar_vector_multiply(self.omega, residual))
for i in range(num_threads):
start = i * chunk_size # start jest indeksem w A. Wątki otrzymują kolejny punkt startowy będący wielokrotnością rozmiaru porcji na wątek
end = n if i == num_threads - 1 else (i + 1) * chunk_size
thread = threading.Thread(target=vector_vector_addition, args=(A, b, x, omega, start, end))
threads.append(thread)
thread.start()
for thread in threads:
thread.join()
if (linAlg.SequentialLinearAlgebraUtils.vector_norm(residual) < self.tol):
break
end_time = time.perf_counter()
gc.enable()
total_time = end_time - start_time
sequential_time = total_time - longest_time_accumulator.total_time
print(f"Total: {total_time:.3e}s, Seq: {sequential_time:.3e}s, Parallel (threads): {longest_time_accumulator.total_time:.3e}s, Tests time: {tests_time.total_time:.3e}s")
return x, 0
# # Przykładowe dane wejściowe
# np.random.seed(0) # Ustalanie ziarna dla powtarzalności wyników
# A = np.random.rand(20, 20) + 20 * np.eye(20) # Macierz przekątniowa z losowymi elementami
# b = np.random.rand(20) # Wektor wyrazów wolnych
# omega = 0.2
# n_iterations = 1000
# # Rozwiązanie układu równań metodą Richardson'a
# x = RichardsonMethodThreads(A, b, 5, 5, n_iterations)
# print("Rozwiązanie: ", x)

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@ -1,13 +1,22 @@
import time
import sys
from functools import wraps
class TimeAccumulator:
def __init__(self):
self.total_time = 0
class ComplexTimeAcumulator:
def __init__(self):
self.total_time = 0
self.start = sys.float_info.max
self.end = 0
time_accumulator = TimeAccumulator()
tests_time = TimeAccumulator()
longest_time_accumulator = ComplexTimeAcumulator()
def time_measurement(accumulator):
def decorator(func):
@wraps(func)
@ -20,6 +29,22 @@ def time_measurement(accumulator):
return inner
return decorator
def time_measurement_longest(accumulator: ComplexTimeAcumulator):
def decorator(func):
@wraps(func)
def inner(*args, **kwargs):
start = time.perf_counter()
result = func(*args, **kwargs)
end = time.perf_counter()
if start < accumulator.start:
accumulator.start = start
if end > accumulator.end:
accumulator.end = end
accumulator.total_time = accumulator.end - accumulator.start # "=" instead of "+="
return result
return inner
return decorator